How to Respond When You Disagree With a Reviewer

Disagreement with a reviewer is acceptable when it is evidence-based, specific, and professional. The goal is to resolve the scientific concern, not to win an argument.

Written by Tezyar Research Editorial TeamLast reviewed: September 19, 2026
Quick Answer

When you disagree with a reviewer, first identify the underlying concern and check whether a clarification could resolve it. Then acknowledge the point, state your position without defensive language, explain the evidence or methodological rationale, and cite relevant literature where useful. If the requested change would be inappropriate or impossible, explain why. Even when you keep the original approach, consider revising the manuscript to prevent the same misunderstanding for future readers.

Separate the Concern From the Requested Fix

A reviewer may correctly identify a clarity problem but suggest a change that is not methodologically appropriate. Address the valid concern even if you reject the exact requested solution.

Use Evidence, Not Authority

Avoid saying that a method was used simply because it is common or because the authors are experienced. Explain the study-specific rationale and supporting evidence.

Offer a Constructive Alternative

If the requested analysis cannot be justified, consider a sensitivity analysis, clearer limitation, additional explanation, or narrowed conclusion that addresses the concern without introducing a misleading result.

Escalate Conflicts Through the Editor

If reviewer requests conflict with each other or with the editor's instructions, explain the conflict clearly in the response letter and, when needed, ask the editor for direction rather than guessing.

Related Guides
How to Respond to Peer Reviewer Comments →Major Revision vs Minor Revision: What Should Authors Do? →How to Write a Point-by-Point Response to Reviewers →Response to Reviewers Examples: Structure and Best Practices →
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Frequently asked questions

Will disagreeing with a reviewer cause rejection?

Not automatically. A respectful, evidence-based disagreement is a normal part of peer review, but an unsupported or dismissive response can hurt the revision.

Should I cite references in a rebuttal?

When the disagreement concerns theory, methods, or established practice, relevant references can strengthen the explanation.

What if two reviewers ask for opposite changes?

Explain the conflict and your chosen solution, and prioritize the editor's direction if it is available.

References

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Tezyar can help formulate a defensible rebuttal while keeping the revised manuscript and response letter consistent.

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